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LSF is treating the whole container as "the job". Nothing from LSF is running "in" the container. SBD/RES are capturing the stdout/err from the container, which cannot be written to a path that only exists in the container.
Copying the output from the host, into the container and then to the nfs mount would be fairly inefficient.
The simplest solution would be to just have the script write directly to the path:
"bsub -app script > /path_in_container"